Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929922.1_cds_XP_016477116.1_68883
CDS Infomation

[gene=LOC107798608] [db_xref=GeneID:107798608] [protein=BTB/POZ domain-containing protein NPY2-like] [protein_id=XP_016477116.1] [location=complement(join(63350..63916,64322..65497,66094..66163,67615..67676))] [gbkey=CDS]
Sequence

ATGAAGTTCATGAAACTTGGATCCAAGCCTGATACCTTTCAGTCAGATGGGAACAATATC
AGATATGTTGCTTCGGAGTTGGCCTCTGACATCACGGTTAATGTCGGAGATGTAAAGTTT
TACTTGCACAAGTTTCCTCTTCTGTCCAAGAGTACCTCTTTGCAAAAGCTGTTTGCTAAT
GCAAGTGAAGCAAATTGTGATGATGTTCACATTCATGACATTCCTGGAGGACCTACTGCC
TTTGAAATATGTGCCAAGTTTTGTTACGGCATGACTGTTACACTGAATGCTTATAATGTC
ATTGTAGCAAGGTGTGCTGCTGAGTATCTGGGTATGCATGAAACTATTGAGAAAGGAAAC
CTTATTTACAAGATTGATGTTTTCCTGAACTCGAGCATTTTCCGGAGCTGGAAAGATTCA
ATAATAGTTCTTCAAACTACTAAGTCTCAGTCACGTTTGTGTGAAGAACTGAAGTTGATC
AGCCACTGCATTGATGCTATAGCTTCCAAGGCTTCAATTGATGTTGACAGAGTGGATTGG
TCCTATACATATAACCGGAAAAAGCTTCCAGAGGAGAACGGAAATGATCCTAATTTGAAC
GGTATTAGAAGCCGCATGGTGCCAAAAGATTGGTGGGTTGAGGACTTAAGTGAGCTTGAA
GTTGATTTATATAAGCGGGTAATTGTCACCATTAAAAACAAAGGCATTGTTTCCTCTGAA
GTAATTGGAGAAGCTGTGAAAGCTTATGCTTATAGAAGGTTTCCAGGCTTTAATAAAGGT
GTTTTCCAGTTCAATGATGTCTCCAAATGTCGTGCAATATTGGATACGATTGTATGGCTA
TTGCCCTCTGAGAAAGGCTGCGTCTCTTGTAGTTTCTTGTTAAAACTGCTGAGAGCATCA
ATTTCACTTGATTCTGGAGAAATGGCAGAGGCAGAACTAGTTAAAAGAATAGGGCAGCAA
TTGGAGGAGGCTTCTATAAATGATCTTTTGATTCGAGCGGCAGATGGGGAAGGAACCTTG
TATGATGTCCATGTCGTCCAGAAAATACTTGAAGTGTTTATGATGCGAGATAAGGATTCT
GAACCTCAGCTAGAAGATGGAGATGAAATTCAGGAGATCCGAAAGCCTGGGATTTTATCG
GAAGCTTCAAAACTGATGGTGGCAAAGCTAGTAGATGGATACCTTACTGAAATTGCGAAA
GATCCTAATCTCCCTTTGTCAGCATTTGTTGGTCTAGCTGAGATGGTATCCAATTTTCCT
CGACCCGGTCATGATGGTATCTATCGCGCAATTGATATGTACCTTAAGGAGCACCCTGGA
ATCAGCAAGAGTGAGAGGAAGAGAATTTGTAAGCTAATGGACTGCAAGAAGCTCTCTGTG
GATGCTTGTATGCATGCTGTGCAAAACGAGAGGCTTCCCCTTCGTGTTGTTGTGCAAGTG
CTCTTTTTCGAGCAAGTCAGGGCTAATGCCTCGTCTGGGAGCAGTACTCCGGATCTGCCC
AAAGCAATTAGGGAACTTAACAGTGCTTCATATGGAAGTTCAAGATCTGCAACAACTAAT
ACAGAAGAAGATTGGGATGCTGCAGCCTCTGCAGAAGAACTCAGGGCCTTGAGAGGAGAG
CTTGCAGCCTTAAGAATGGGAAATGGAGGAACAAACGACAAAGCTAATGGCGATGCCAAG
AGTCAAGCAGACAGGGCTGCCATGAGTAGAATGAAAGGTTTGCTCATGTCAAAGAGGATC
TTCTCGAAAATCTGGTCGAACAAAGGAGGACAAGGGGAGAATAGTGGCTCAGATTCGTCC
GAGAGTCTTGGATCTGCTAACTTGGAAGAAGCTAAGTCTACACCTTCAAGAAAAGGAAGG
CATTCAGTTTCTTAG

Peptide Sequence

PEP ID

XP_016477116.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein NPY2-like [Nicotiana tabacum]
Sequence

MKFMKLGSKPDTFQSDGNNIRYVASELASDITVNVGDVKFYLHKFPLLSKSTSLQKLFAN
ASEANCDDVHIHDIPGGPTAFEICAKFCYGMTVTLNAYNVIVARCAAEYLGMHETIEKGN
LIYKIDVFLNSSIFRSWKDSIIVLQTTKSQSRLCEELKLISHCIDAIASKASIDVDRVDW
SYTYNRKKLPEENGNDPNLNGIRSRMVPKDWWVEDLSELEVDLYKRVIVTIKNKGIVSSE
VIGEAVKAYAYRRFPGFNKGVFQFNDVSKCRAILDTIVWLLPSEKGCVSCSFLLKLLRAS
ISLDSGEMAEAELVKRIGQQLEEASINDLLIRAADGEGTLYDVHVVQKILEVFMMRDKDS
EPQLEDGDEIQEIRKPGILSEASKLMVAKLVDGYLTEIAKDPNLPLSAFVGLAEMVSNFP
RPGHDGIYRAIDMYLKEHPGISKSERKRICKLMDCKKLSVDACMHAVQNERLPLRVVVQV
LFFEQVRANASSGSSTPDLPKAIRELNSASYGSSRSATTNTEEDWDAAASAEELRALRGE
LAALRMGNGGTNDKANGDAKSQADRAAMSRMKGLLMSKRIFSKIWSNKGGQGENSGSDSS
ESLGSANLEEAKSTPSRKGRHSVS

Transcript Sequence

Gene sequence data has not been registered.